I had a problem with a Windows 2003 DC (
PDC role), it refused to provide
NTP for the domain (
despite I did all advised configuration in Registry), so solution was to change GPO for "Default Domain Controller Policy":
Computer Configuration\Administrative Templates\System\Windows Time Service\Time Providers\Enable Windows NTP Server to Enabled.
You need to use windows w32tm.exe utility with different option to diagnose NTP problems on the domain.